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Journal Publications(Peer Reviewed) 

  1. Chen Xingwei, Thohirah Lee Abdullah, Sima Taheri, Nur Ashikin Psyquay Abdullah, Siti Aishah Hassan. 2016. Flower ontogenesis and fruit development of Synsepalum dulcificum. HortScience, 51(6): 697-702.  PDF
  2. Ehsan Karimi, Hawa Z.E. Jaafar, Maheran Abdul Aziz, Sima Taheri, and Reza Azadi. 2013. Genetic relationship among Labisia pumila (Myrsinaceae) species based on ISSR-PCR. Genetics and Molecular Research. 13 (2):3301-9. PDF
  3. Gorjian, S., & Ghobadian, B. (2015). Solar desalination: A sustainable solution to water crisis in Iran. Renewable and Sustainable Energy Reviews, 48, 571–584. doi:10.1016/j.rser.2015.04.009 (IF: 8.050).
  4. Gorjian, S., & Ghobadian, B. (2015). Solar thermal power plants: Progress and prospects in Iran. Journal of Energy Procedia, 75, 533-539.
  5. Gorjian, S., Ghobadian, B., Hashjin, T. T., & Banakar, A. (2014). Thermal Performance Evaluation of a Proposed Point-focus Solar Collector for Low Power Applications. Iranian Journal of Science and Technology (IJST),Transactions of Mechanical Engineering,
    38(38M1+), 263–268 (IF: 0.595).
  6. Gorjian, S., Ghobadian, B., Tavakkoli Hashjin, T (2015). Modeling of solar radiation potential in Iran using artificial neural networks. Journal of Agricultural Science and Technology (JAST) (Accepted) (IF: 0.813).
  7. Gorjian, S., Ghobadian, B., Tavakkoli Hashjin, T., & Banakar, A. (2014). Experimental performance evaluation of a stand-alone point-focus parabolic solar still. Desalination, 352(3), 1–17 (IF: 5.527).
  8. Gorjian, S., Hashjin, T. T., & Khoshtaghaza, M. H. (2011). Designing and optimizing a back propagation neural network to model a thin-layer drying process. International Agrophysics, 25(1), 13–19 (IF:0.967).
  9. Gorjian, S., Tavakkoli Hashjin, T., Ghobadian, B., Banakar, A., & Tavakoli Hashjin, T. (2015). Thermal Performance Evaluation of a Medium-Temperature Point-focus Solar Collector Using Local Weather Data and Artificial Neural Networks. International Journal of
    Green Energy, 12(5), 493-505 (IF: 1.454).
  10. Gorjian, S., Tavakkoli Hashjin, T., Khoshtaghaza, M. H., & Nikbakht, A. M. (2011). Drying Kinetics and Quality of Barberry in a Thin Layer Dryer. Journal of Agricultural Science and Technology (JAST), 13(3), 303–314 (IF: 0.813).
  11. Gorjian, S., Tavakkoli Hashjin, T., Khoshtaghaza, M. H., (2011). Drying Kinetics Modeling of a Thin-layer Barberry Using Artificial Neural Networks. Iranian Journal of Nutrition Sciences and Food Technology (In Persian).
  12. Haw, C.L, W.I.W. Ismail, Bejo. S.K., Putih A., and Ramin Shamshiri. 2014. Colour vision to determine paddy maturity. J. of Agric & Biol Eng., 7(5): 55-63. Q2. IF:1.007. [PDF]
  13. Hosseini, A., Banakar, A., Gorjian, S., 2018. Development and performance evaluation of an active solar distillation system integrated with a vacuum-type heat exchanger. Desalination (IF:5.527).
  14. Kadkhodaei, S., Barantalab, F., Taheri, S., Foroughi, M., Hashemi, F. G., Shabanimofrad, M. R., ... & Azizi, P. (2016). BioInfoBase: A Bioinformatics Resourceome. arXiv preprint arXiv:1607.02974. PDF
  15. Loni, R., E, Askari Asli-ardeh., Ghobadian, B., Sh, Gorjian (2017). Thermodynamic Analysis of a Solar Dish Receiver using Different Nanofluids. Journal of Energy, 133, 749-760 (IF: 4.520).
  16. Loni, R., E, Askari Asli-ardeh., Ghobadian, B., Sh, Gorjian., 2017. Numerical and experimental investigation of wind effect on a hemispherical cavity receiver. Applied Thermal Engineering, 126, 179-193 (IF: 3.356).
  17. Mahbod Sahebi, A.J.  van Wijnen, Parisa Azizi, Rambod Abiri, Sadegh ashkani, Sima Taheri. 2016. Towards Understanding Pre-mRNA Splicing Mechanisms and the Role of SR Proteins. Gene. 587(2): 107–119. PDF
  18. Mahbod Sahebi, Mohamed M Hanafi, Andre J van Wijnen, A Siti Nor Akmar, Parisa Azizi, Abu Seman Idris, Sima Taheri, Majid Foroughi. 2017. Profiling secondary metabolites of plant defence mechanisms and oil palm in response to Ganoderma boninense attack. International Biodeterioration & Biodegradation. 122: 151-164. PDF
  19. Mahbod Sahebi, Mohamed M. Hanafi, Mohd Yusop Rafii, Hasmah Mohidin, P Azizi, Abu Seman Idris, Fariz Adzmi, Rambod Abiri, Sima Taheri, and Mehdi Moradpoor. 2018. Antioxidant enzyme activities and secondary metabolite profiling of oil palm seedlings treated with combination of NPK fertilizers infected with Ganoderma boninense. BioMed Research International. In Press. BMRI
  20. Parisa Azizi, Mohd Y. Rafii, Siti Nor Akmar Abdullah, Mohamed M Hanafi, Maziah Mahmood, Mahbod Sahebi, Sadegh Ashkani, Mohammad Faseleh Jahromi, Sima Taheri. 2016. Over-expression of the Pikh gene with a CaMV 35S promoter leads to improved blast disease (Magnaporthe oryzae) tolerance in rice. Frontiers in Plant Science. 7, 773. PDF
  21. Redmond Ramin Shamshiri, James W. Jones, Kelly R. Thorp, Desa Ahmad, Hasfalina Che Man, Sima Taheri. 2018. A Review of Optimum Temperature, Humidity, and Vapor Pressure Deficit for 2 Microclimate Evaluation and Control in Greenhouse Cultivation of Tomato.  International Agrophysics. Accepted. PDF.
  22. Salehian, S., Shamshiri, R., 2015. A Survey on Mobility Management Protocols in Wireless Sensor Network-internet Protocol. Indian Journal of Science and Technology. 8(11):1-8. [PDF]
  23. Shamshiri, R. 2002. Exploring Nebraska Tractor tests. Unimog journal of Farm Machinery Scientific Society, Bu-Ali Sina University. Vol.7. Pages 31-35. (in Farsi) [PDF]
  24. Shamshiri, R. 2002. Introducing solar earthquake park. AHRAM green architecture, Journal of Scientific Society of Architecture. Azad University of Hamedan. Vol.1. Pages 54-64. (in Farsi) [PDF]
  25. Shamshiri, R. 2003. Introducing Anti-lock braking system and how it works. Unimog journal of Farm Machinery Scientific Society, Bu-Ali Sina University. Vol.10. Pages 36-40. (in Farsi) [PDF]
  26. Shamshiri, R. Measuring Optimality degrees of Microclimate Parameters in Protected Cultivation of Tomato under Tropical Climate Condition. Elsevier J. of Measurements. Q1, IF: 2.35 [PDF]
  27. Shamshiri, R. and W. I. W. Ismail, 2014. Investigation of climate control techniques for tropical lowland greenhouses in Malaysia. Applied Sci., 14(1): 60-65. [PDF]
  28. Shamshiri, R. and W.I.W. Ismail, 2012. Nonlinear tracking control of a two link oil palm harvesting robot manipulator. J. of Agric & Biol Eng. 5(2):9-19. Q2. IF:1.007 [PDF]
  29. Shamshiri, R. and W.I.W. Ismail, 2012. Performance evaluation of ventilation and pad-and-fan systems for greenhouse production of tomato in lowland Malaysia. World Res J. of Agri& Bios Eng. 1(1):1-5. [PDF]
  30. Shamshiri, R. and W.I.W. Ismail, 2013. A Review of Greenhouse Climate Control and Automation Systems in Tropical Regions. Agric. Sci. Appl. Volume 2, Issue 3. PP. 176-183.[PDF]
  31. Shamshiri, R. and W.I.W. Ismail, 2013. Design and analysis of full-state feedback controller for a tractor active suspension: implications for crop yield. J. Agric. Biol., 15: 909-914. Q2, IF: 0.9. [PDF]
  32. Shamshiri, R. and W.I.W. Ismail, 2013. Design and simulation of control systems for a field survey mobile robot platform. J. Appl. Sci. Eng. Technol., 6(13): 2307-2315. [PDF]
  33. Shamshiri, R. and W.I.W. Ismail, 2013. Exploring GPS data for operational analysis of farm machinery. J. Appl. Sci. Eng. Technol., 5(12): 3281-3286. [PDF]
  34. Shamshiri, R. and W.I.W. Ismail, 2014. A Comprehensive Comparison between Wave Propagation and Heat Distribution via Analytical Solutions and Computer Simulations. J. Appl. Sci. Eng. Technol., 7(1): 111-122. [PDF]
  35. Shamshiri, R. and W.I.W. Ismail, 2014. Data Acquisition for Monitoring Vapor Pressure Deficit in a Tropical Lowland Shelter-house Plant Production. J. Appl. Sci. Eng. Technol., 7(20): 4175-4181. [PDF]
  36. Shamshiri, R. and Wan Ishak Wan Ismail, 2014. Implementation of Galerkin’s Method and Modal Analysis for Unforced Vibration Response of a Tractor Suspension Model. J. Appl. Sci. Eng. Technol., 7(1): 49-55. [PDF]
  37. Shamshiri, R., Beveren, P. v., Che Man, H., Zakaria, A.J. 2017. Dynamic Assessment of Air Temperature for Tomato (Licopersicon Esculentum Mill) Cultivation in a Naturally Ventilated Net-Screen Greenhouse under Tropical Lowlands Climate. of Agri. Sci & Tech. 19(1):59-72. Q2, IF: 0.85. [PDF]
  38. Shamshiri, R., Che Man, H., Zakaria, A.J., Beveren, P.V., Wan Ismail, W.I. and Ahmad, D. (2017). Membership function model for defining optimality of vapor pressure deficit in closed-field cultivation of tomato. Acta Hortic. 1152, 281-290, DOI: 10.17660/ActaHortic.2017.1152.38. [PDF]
  39. Shamshiri, R., Che Man, H., Zakaria, A.J., Beveren, P.V., Wan Ismail, W.I. and Ahmad, D. (2017). Digital growth response maps for assessment of cooling requirement in greenhouse production of tomato. Acta Hortic. 1152, 117-124. DOI: 10.17660/ActaHortic.2017.1152.16 [PDF]
  40. Shamshiri, R., Ibrahim, B., Desa, A., S. Khairunniza Bejo, Hasfalina C. M., and Z. M. Shad. 2018. An overview of the System of Rice Intensification for Paddy Fields of Malaysia. of . Agric. Studies. 6(1):133-156. [PDF]
  41. Shamshiri, R., James W. Jones, Kelly R. Thorp, Desa, A., Hasfalina C. M, Taheri, S. 2018. A Review of Optimum Temperature, Humidity, and Vapor Pressure Deficit for Microclimate Evaluation and Control in Greenhouse Cultivation of Tomato. International Agrophysics. Q2, IF: 0.96. Accepted. [PDF]
  42. Shamshiri, R., Kalantari, F., K.C. Ting, Kelly Thorp, Hameed, I. A., Weltzien, C., Desa, A., and Z. M. Shad. 2018. Advances in Greenhouse Automation and Controlled Environment Agriculture: Part one: A Transition to Plant Factories and Urban Agriculture. J. Agric. Bio .11(1):1-22. Q2. IF:1.007. [PDF]
  43. Shamshiri, R., Kalantari, F., K.C. Ting, Kelly Thorp, Hameed, I. A., Weltzien, C., Desa, A., and Z. M. Shad. 2018. Advances in Greenhouse Automation and Controlled Environment Agriculture: Part two: Moving toward sustainability. J. Agric. Bio . Q2. IF:1.007. Accepted
  44. Shamshiri, R., R. Ehsani, J. M. Maja, and Fritz M. Roka. 2013. Determining machine efficiency parameters for a citrus canopy shaker using yield monitor data. ASABE Applied Eng. in Agric. 29(1):33-41. Q3, IF: 0.55. [PDF].
  45. Shamshiri, R., W.I.W. Ismail., and Ahmad, D.B. 2014. Experimental evaluation of air temperature, relative humidity and vapor pressure deficit in Tropical Lowland Plant Production Environments. Advances in Env. Bio. 8(22):5-13. [PDF]
  46. Sima Taheri*, Jalal Saba, Farid Shekari, and Thohirah Lee Abdullah. 2011. Effects of drought stress condition on the yield of spring wheat (Triticum aestivum) lines. African Journal of biotechnology. 10 (80), pp. 18339-18348. PDF
  47. Sima Taheri*, Jalal Saba, Farid Shekari, and Thohirah Lee Abdullah. 2011. Physiological responses of tolerant spring wheat lines under water stress. Journal of Food Agriculture and environment. 9 (3&4): 545-551. PDF
  48. Sima Taheri*, Thohirah Lee Abdullah, Ehsan Karimi, Ehsan Oskoueian, Mahdi Ebrahimi. 2014. Antioxidant capacities and total phenolic contents increase with acute gamma irradiation in Curcuma alismatifolia (Zingiberaceae) leaves. International journal of molecular science (IJMS). 15, 13077-13090; doi: 10.3390/ijms150713077. PDF
  49. Sima Taheri*, Thohirah Lee Abdullah, Mahbod Sahebi, Parisa Azizi. 2017. TILLING, high-resolution melting (HRM), and next-generation sequencing (NGS) techniques in plant mutation breeding. Molecular (2017) 37: 40. doi:10.1007/s11032-017-0643-7. PDF
  50. Sima Taheri*, Thohirah Lee Abdullah, Nur Ashikin Psyquay Abdullah, & Zaiton Ahmad. 2014. Application of High Resolution Melting for Detection of Induced DNA Polymorphism in Curcuma alismatifolia. European journal of horticultural science. V79 (6): pp 306–312. PDF
  51. Sima Taheri*, Thohirah Lee Abdullah, Nur Ashikin Psyquay Abdullah, Zaiton Ahmad, Ehsan Karimi, M.R. Shabanimofrad. 2014. Assessing genetic relationships of Curcuma alismatifolia varieties by simple sequence repeat (SSR) markers. Genetics and Molecular Research, 13(3): 7339-7346. PDF
  52. Sima Taheri*, Thohirah Lee Abdullah, Nur Ashikin Psyquay Abdullah, and Zaiton Ahmad. 2013. Use of Intersimple Sequence Repeat Assay for Detection of DNA Polymorphism Induced by Gamma Rays in Curcuma alismatifolia. HortScience, 48:1346-1351. PDF
  53. Sima Taheri*, Thohirah Lee Abdullah, Nur Ashikin Psyquay Abdullah, and Zaiton Ahmad. 2012. Genetic relationships among five varieties of Curcuma alismatifolia (Zingiberaceae) based on ISSR markers. Genetics and Molecular Research 11 (3): 3069-3076. PDF
  54. Sima Taheri*, Thohirah Lee Abdullah, Zaiton Ahmad, Nur Ashikin Psyquay Abdullah. 2014. Effect of acute gamma irradiation on Curcuma alismatifolia varieties and detection of DNA polymorphism through SSR marker. BioMed Research International. 2014: 1-18. PDF
  55. Sima Taheri*, Thohirah Lee Abdullah. 2016. Phenotypic and molecular effects of chronic gamma irradiation on Curcuma alismatifolia. European journal of horticultural sciences. 81 (3), 137-147. PDF
  56. Sima Taheri*, Thohirah, L.A., Abdullah, N.A.P. and Ahmad, Z. (2013). Effect of chronic gamma irradiation on vase life of curcuma alismatifolia Acta Horticulture (ISHS). 1012, 547-550.Doi:10.17660/ActaHortic.2013.1012.73. PDF
  57. Sima Taheri, Thohirah Lee Abdullah, Mahbod Sahebi, Parisa Azizi. 2017. An in silico approach for characterization of encoded protein from Rdr1, a black spot resistance gene in Rosa multiflora. Journal of Plant Disease and Protection. Doi:10.1007/s41348-017-0083-y. PDF
  58. Sima Taheri, Thohirah Lee Abdullah, Mohd Rafii Yusop, Mohamed Musa Hanafi, Mahbod Sahebi, Parisa Azizi, and Redmond Ramin Shamshiri. 2018. Mining and Development of Novel SSR Markers Using Next Generation Sequencing (NGS) Data in Plants. Molecules. 23:1-20. PDF
  59. Taheri, Sima, Thohirah Lee Abdullah, Mohd Rafii Yusop, Mohamed Musa Hanafi, Mahbod Sahebi, Parisa Azizi, and Redmond Ramin Shamshiri. 2018. Mining and Development of Novel SSR Markers Using Next Generation Sequencing (NGS) Data in Plants. MDPI Molecules. 23(2): 399. IF:2.98
  60. Yamin, M., A.N. M. Sultan, W.I.W. Ismail, Shamshiri, and F. Akbar. 2015. Impact of Sewage and Industrial Effluents on Water Quality in Faisalabad, Pakistan. Advances in Environmental Biology. 9(18):53-58 [PDF]
  61. Yamin, M., W.I.W. Ismail, M. Saufi M. Kassim, Samsuzana A. Aziz, Shamshiri. 2016. VRT liquid fertilizer applicator for soil nutrient management. Jurnal Teknologi. 78(1-2):73-78 [PDF]
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